CDS

Accession Number TCMCG006C101010
gbkey CDS
Protein Id XP_013667030.1
Location join(8845228..8845518,8845643..8845823,8845904..8846039,8846124..8846234,8846300..8846402,8846472..8846615,8846686..8846793,8846878..8847097,8847180..8847312,8847403..8847568)
Gene LOC106371493
GeneID 106371493
Organism Brassica napus

Protein

Length 530aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013811576.2
Definition lycopene epsilon cyclase, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Lycopene epsilon cyclase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R06960        [VIEW IN KEGG]
R06963        [VIEW IN KEGG]
R07840        [VIEW IN KEGG]
KEGG_rclass RC01612        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K06444        [VIEW IN KEGG]
EC 5.5.1.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009975        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016123        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016860        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0045435        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTGTGTTGGTGCTCGTAATTTCGCTGCAACGGCGGTCATAGCTTTTCCGTCTTGGAGTTCTTCGCGTAAAAACTATCCGGTGGTTAATAGATACAGCTTTAGTAATCTCCGGTGCGGTTTTGTTAAAGTCAGAGCTAGCGGCGGCGGAGCAGGTTCCGGTTGCGTGGCGGTGAGAGAGGATTACGCCGACGAGGAAGACTTCGTGAAGGCTGGTGGTTCGGAGATTCTATACGTTCAAATGCAGCAAAACAAAGACATGGATGAACAGTCTAAGCTTGTTGATAAGTTACCTCCTATATCAACTGGTGGTGAAGGTGGTGGTGCTTTGGACCTAGTGGTTATTGGTTGTGGTCCTGCTGGTTTAGCCTTGGCTGCAGAATCAGCAAGGTTAGGTCTCAAAGTTGGACTCATTGGTCCTGATCTTCCTTTCACTAACAACTACGGTGTTTGGGAAGATGAGTTCAACGATCTTGGCTTGCAAAAATGTATTGAGCATGTTTGGAGAGATACCCTTGTGTATCTGGACGATGACAATCCTATTACCATTGGTCGTGCTTATGGAAGAGTTAGTCGACGTTTACTTCACGAGGAGCTCTTGAGGAGGTGTGTGGAGTCAGGTGTCTCGTATCTTAGCTCCAAAGTTGAGAGCATAACAGAAGCTCCTGATGGCCTTAGGCTTGTTTCCTGTGAACAAAACACCCTTGTTCCCTGCAGGCTTGCCACTGTTGCTTCTGGAGCAGCTTCAGGGAAGCTCTTGCAATACGAAGTTGGGGGGCCTAGAGTCTGTGTCCAAACTGCTTACGGCTTGGAGGTTGAGGTGGAAAACAGTCCATATGATCCAGAGCAGATGGTGTTCATGGATTACAGAGATTATACAAACGAGAAAATCCGGAGCTTAGAAGCTGAGTATCCAACGTTTCTCTACGCCATGCCTATGACAAAGACAAGGGTCTTCTTTGAGGAGACATGTCTTGCTTCAAAAGATGTCATGCCCTTTGATTTGCTTAAAAAGAAGCTCATGTTAAGATTAGATACACTCGGTATCCGAATACTAAAGACTTATGAAGAGGAATGGTCTTATATCCCAGTAGGTGGTTCCTTGCCGAACACGGAACAAAAGAATCTCGCCTTTGGCGCTGCAGCTAGCATGGTACATCCTGCAACAGGCTATTCAGTTGTGAGATCTTTGTCTGAAGCTCCAAAATACGCATCAGTCATCGCTAATATACTAAAACATGAGACCACTACTTCCTTCACCAGACACATCAACACCAATATTTCAAGACAAGCTTGGGATACTTTATGGCCACCAGAAAGGAAACGCCAAAGAGCATTCTTTCTCTTTGGTCTTGCGCTCATAGTTCAACTCGACATCGAAGGCATTAGATGCTTCTTCCACACTTTCTTCCGCCTTCCAAAATGGATGTGGAGAGGGTTTCTAGGATCAACATTAACATCAGGAGACCTCGTTCTGTTTGCTTTCTACATGTTCATCATTGCACCAAACACTTTAAGAAAAGGTCTCATCAATCATCTTATCTCTGATCCAACCGGAGCAACCATGATTAAAACCTATCTTAAAGTATGA
Protein:  
MECVGARNFAATAVIAFPSWSSSRKNYPVVNRYSFSNLRCGFVKVRASGGGAGSGCVAVREDYADEEDFVKAGGSEILYVQMQQNKDMDEQSKLVDKLPPISTGGEGGGALDLVVIGCGPAGLALAAESARLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRDTLVYLDDDNPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVESITEAPDGLRLVSCEQNTLVPCRLATVASGAASGKLLQYEVGGPRVCVQTAYGLEVEVENSPYDPEQMVFMDYRDYTNEKIRSLEAEYPTFLYAMPMTKTRVFFEETCLASKDVMPFDLLKKKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIANILKHETTTSFTRHINTNISRQAWDTLWPPERKRQRAFFLFGLALIVQLDIEGIRCFFHTFFRLPKWMWRGFLGSTLTSGDLVLFAFYMFIIAPNTLRKGLINHLISDPTGATMIKTYLKV